cd /home/chen/datashare/hizGC/out_mod/p1_Z0.00561/p1_Z0.00561_t4800g6.000k2mxl1.25
ln -s /tmp/atlas12_data_files/molecules.dat_atlas12 fort.2
cp -f p1_Z0.00561_t4800g6.000k2mxl1.25os.atlas12.20240130-115108 fort.3
sed -i '/TITLE/d' fort.3
sed -i '/OPACITY/d' fort.3
sed -i '/CONVECTION/d' fort.3
sed -i '/ABUN/d' fort.3
sed -i '/^\ *1H\ /d' fort.3
sed -i '/^\ *3Li/d' fort.3
sed -i '/^\ *8O\ /d' fort.3
sed -i '/^\ *13Al/d' fort.3
sed -i '/^\ *18Ar/d' fort.3
sed -i '/^\ *23V\ /d' fort.3
sed -i '/^\ *28Ni/d' fort.3
sed -i '/^\ *33As/d' fort.3
sed -i '/^\ *38Sr/d' fort.3
sed -i '/^\ *43Tc/d' fort.3
sed -i '/^\ *48Cd/d' fort.3
sed -i '/^\ *53I\ /d' fort.3
sed -i '/^\ *58Ce/d' fort.3
sed -i '/^\ *63Eu/d' fort.3
sed -i '/^\ *68Er/d' fort.3
sed -i '/^\ *73Ta/d' fort.3
sed -i '/^\ *78Pt/d' fort.3
sed -i '/^\ *83Bi/d' fort.3
sed -i '/^\ *88Ra/d' fort.3
sed -i '/^\ *93NP/d' fort.3
sed -i '/^\ *98Cf/d' fort.3
ln -s /tmp/atlas12_data_files/fclowlines.bin fort.11
ln -s /tmp/atlas12_data_files/fchighlines.bin fort.21
ln -s /tmp/atlas12_data_files/diatomicsiwl.bin fort.31
ln -s /tmp/atlas12_data_files/tioschwenke.bin fort.41
ln -s /tmp/atlas12_data_files/h2ofastfix.bin fort.51
time nice -20 /home/chen/datashare/hizGC/code//atlas12.exe<<EOF>/home/chen/datashare/hizGC/out_mod/p1_Z0.00561/p1_Z0.00561_t4800g6.000k2mxl1.25/p1_Z0.00561_t4800g6.000k2mxl1.25.aout
MOLECULES ON
READ MOLECULES
ABUNDANCE ABSOLUTE 1 0.919329
ABUNDANCE ABSOLUTE 2 0.080260
ABUNDANCE ABSOLUTE 3 -9.264192
ABUNDANCE ABSOLUTE 4 -11.397947
ABUNDANCE ABSOLUTE 5 -10.247947
ABUNDANCE ABSOLUTE 6 -4.177947
ABUNDANCE ABSOLUTE 7 -4.617846
ABUNDANCE ABSOLUTE 8 -3.617947
ABUNDANCE ABSOLUTE 9 -7.912185
ABUNDANCE ABSOLUTE 10 -4.377946
ABUNDANCE ABSOLUTE 11 -6.587946
ABUNDANCE ABSOLUTE 12 -4.897847
ABUNDANCE ABSOLUTE 13 -6.127846
ABUNDANCE ABSOLUTE 14 -4.977947
ABUNDANCE ABSOLUTE 15 -7.012085
ABUNDANCE ABSOLUTE 16 -5.237746
ABUNDANCE ABSOLUTE 17 -6.972185
ABUNDANCE ABSOLUTE 18 -6.072185
ABUNDANCE ABSOLUTE 19 -7.362085
ABUNDANCE ABSOLUTE 20 -6.167846
ABUNDANCE ABSOLUTE 21 -9.301985
ABUNDANCE ABSOLUTE 22 -7.577946
ABUNDANCE ABSOLUTE 23 -8.797946
ABUNDANCE ABSOLUTE 24 -7.127846
ABUNDANCE ABSOLUTE 25 -7.407847
ABUNDANCE ABSOLUTE 26 -5.277946
ABUNDANCE ABSOLUTE 27 -7.877846
ABUNDANCE ABSOLUTE 28 -6.547947
ABUNDANCE ABSOLUTE 29 -8.587847
ABUNDANCE ABSOLUTE 30 -8.197846
ABUNDANCE ABSOLUTE 31 -9.592185
ABUNDANCE ABSOLUTE 32 -9.062185
ABUNDANCE ABSOLUTE 33 -10.102085
ABUNDANCE ABSOLUTE 34 -9.062185
ABUNDANCE ABSOLUTE 35 -9.842085
ABUNDANCE ABSOLUTE 36 -9.161985
ABUNDANCE ABSOLUTE 37 -9.872085
ABUNDANCE ABSOLUTE 38 -9.502185
ABUNDANCE ABSOLUTE 39 -10.232085
ABUNDANCE ABSOLUTE 40 -9.872085
ABUNDANCE ABSOLUTE 41 -11.052185
ABUNDANCE ABSOLUTE 42 -10.552085
ABUNDANCE ABSOLUTE 43 -20.000000
ABUNDANCE ABSOLUTE 44 -10.632085
ABUNDANCE ABSOLUTE 45 -11.351985
ABUNDANCE ABSOLUTE 46 -10.782085
ABUNDANCE ABSOLUTE 47 -11.532085
ABUNDANCE ABSOLUTE 48 -10.702085
ABUNDANCE ABSOLUTE 49 -10.812085
ABUNDANCE ABSOLUTE 50 -10.472185
ABUNDANCE ABSOLUTE 51 -11.472185
ABUNDANCE ABSOLUTE 52 -10.232085
ABUNDANCE ABSOLUTE 53 -10.962085
ABUNDANCE ABSOLUTE 54 -10.301985
ABUNDANCE ABSOLUTE 55 -11.342085
ABUNDANCE ABSOLUTE 56 -10.342085
ABUNDANCE ABSOLUTE 57 -11.301985
ABUNDANCE ABSOLUTE 58 -10.892085
ABUNDANCE ABSOLUTE 59 -11.762185
ABUNDANCE ABSOLUTE 60 -10.972185
ABUNDANCE ABSOLUTE 61 -20.000000
ABUNDANCE ABSOLUTE 62 -11.462085
ABUNDANCE ABSOLUTE 63 -11.952185
ABUNDANCE ABSOLUTE 64 -11.351985
ABUNDANCE ABSOLUTE 65 -12.572185
ABUNDANCE ABSOLUTE 66 -11.332085
ABUNDANCE ABSOLUTE 67 -12.212185
ABUNDANCE ABSOLUTE 68 -11.542185
ABUNDANCE ABSOLUTE 69 -12.472185
ABUNDANCE ABSOLUTE 70 -11.392085
ABUNDANCE ABSOLUTE 71 -12.412085
ABUNDANCE ABSOLUTE 72 -11.602185
ABUNDANCE ABSOLUTE 73 -12.602185
ABUNDANCE ABSOLUTE 74 -11.362085
ABUNDANCE ABSOLUTE 75 -12.192185
ABUNDANCE ABSOLUTE 76 -11.112085
ABUNDANCE ABSOLUTE 77 -11.122085
ABUNDANCE ABSOLUTE 78 -10.672185
ABUNDANCE ABSOLUTE 79 -11.462085
ABUNDANCE ABSOLUTE 80 -11.342085
ABUNDANCE ABSOLUTE 81 -11.572185
ABUNDANCE ABSOLUTE 82 -10.522185
ABUNDANCE ABSOLUTE 83 -11.762185
ABUNDANCE ABSOLUTE 84 -20.000000
ABUNDANCE ABSOLUTE 85 -20.000000
ABUNDANCE ABSOLUTE 86 -20.000000
ABUNDANCE ABSOLUTE 87 -20.000000
ABUNDANCE ABSOLUTE 88 -20.000000
ABUNDANCE ABSOLUTE 89 -20.000000
ABUNDANCE ABSOLUTE 90 -12.392085
ABUNDANCE ABSOLUTE 91 -20.000000
ABUNDANCE ABSOLUTE 92 -12.972185
ABUNDANCE ABSOLUTE 93 -20.000000
ABUNDANCE ABSOLUTE 94 -20.000000
ABUNDANCE ABSOLUTE 95 -20.000000
ABUNDANCE ABSOLUTE 96 -20.000000
ABUNDANCE ABSOLUTE 97 -20.000000
ABUNDANCE ABSOLUTE 98 -20.000000
ABUNDANCE ABSOLUTE 99 -20.000000
READ PUNCH
READ LINES
CONVECTION OVER 1.25 0 36
TEFF 4800 GRAVITY 6.000
ITERATIONS 1 PRINT 1 PUNCH 0
BEGIN
END
EOF
mv fort.12 for12
rm -f fort.*
cp -f p1_Z0.00561_t4800g6.000k2mxl1.25os.atlas12.20240130-115108 fort.3
sed -i '/TITLE/d' fort.3
sed -i '/OPACITY/d' fort.3
sed -i '/CONVECTION/d' fort.3
sed -i '/ABUN/d' fort.3
sed -i '/^\ *1H\ /d' fort.3
sed -i '/^\ *3Li/d' fort.3
sed -i '/^\ *8O\ /d' fort.3
sed -i '/^\ *13Al/d' fort.3
sed -i '/^\ *18Ar/d' fort.3
sed -i '/^\ *23V\ /d' fort.3
sed -i '/^\ *28Ni/d' fort.3
sed -i '/^\ *33As/d' fort.3
sed -i '/^\ *38Sr/d' fort.3
sed -i '/^\ *43Tc/d' fort.3
sed -i '/^\ *48Cd/d' fort.3
sed -i '/^\ *53I\ /d' fort.3
sed -i '/^\ *58Ce/d' fort.3
sed -i '/^\ *63Eu/d' fort.3
sed -i '/^\ *68Er/d' fort.3
sed -i '/^\ *73Ta/d' fort.3
sed -i '/^\ *78Pt/d' fort.3
sed -i '/^\ *83Bi/d' fort.3
sed -i '/^\ *88Ra/d' fort.3
sed -i '/^\ *93NP/d' fort.3
sed -i '/^\ *98Cf/d' fort.3
ln -s /tmp/atlas12_data_files/molecules.dat_atlas12 fort.2
ln -s /tmp/atlas12_data_files/nltelines.bin fort.19
ln -s for12 fort.12
time nice -20 /home/chen/datashare/hizGC/code//atlas12.exe<<EOF>/home/chen/datashare/hizGC/out_mod/p1_Z0.00561/p1_Z0.00561_t4800g6.000k2mxl1.25/p1_Z0.00561_t4800g6.000k2mxl1.25.bout
MOLECULES ON
READ MOLECULES
ABUNDANCE ABSOLUTE 1 0.919329
ABUNDANCE ABSOLUTE 2 0.080260
ABUNDANCE ABSOLUTE 3 -9.264192
ABUNDANCE ABSOLUTE 4 -11.397947
ABUNDANCE ABSOLUTE 5 -10.247947
ABUNDANCE ABSOLUTE 6 -4.177947
ABUNDANCE ABSOLUTE 7 -4.617846
ABUNDANCE ABSOLUTE 8 -3.617947
ABUNDANCE ABSOLUTE 9 -7.912185
ABUNDANCE ABSOLUTE 10 -4.377946
ABUNDANCE ABSOLUTE 11 -6.587946
ABUNDANCE ABSOLUTE 12 -4.897847
ABUNDANCE ABSOLUTE 13 -6.127846
ABUNDANCE ABSOLUTE 14 -4.977947
ABUNDANCE ABSOLUTE 15 -7.012085
ABUNDANCE ABSOLUTE 16 -5.237746
ABUNDANCE ABSOLUTE 17 -6.972185
ABUNDANCE ABSOLUTE 18 -6.072185
ABUNDANCE ABSOLUTE 19 -7.362085
ABUNDANCE ABSOLUTE 20 -6.167846
ABUNDANCE ABSOLUTE 21 -9.301985
ABUNDANCE ABSOLUTE 22 -7.577946
ABUNDANCE ABSOLUTE 23 -8.797946
ABUNDANCE ABSOLUTE 24 -7.127846
ABUNDANCE ABSOLUTE 25 -7.407847
ABUNDANCE ABSOLUTE 26 -5.277946
ABUNDANCE ABSOLUTE 27 -7.877846
ABUNDANCE ABSOLUTE 28 -6.547947
ABUNDANCE ABSOLUTE 29 -8.587847
ABUNDANCE ABSOLUTE 30 -8.197846
ABUNDANCE ABSOLUTE 31 -9.592185
ABUNDANCE ABSOLUTE 32 -9.062185
ABUNDANCE ABSOLUTE 33 -10.102085
ABUNDANCE ABSOLUTE 34 -9.062185
ABUNDANCE ABSOLUTE 35 -9.842085
ABUNDANCE ABSOLUTE 36 -9.161985
ABUNDANCE ABSOLUTE 37 -9.872085
ABUNDANCE ABSOLUTE 38 -9.502185
ABUNDANCE ABSOLUTE 39 -10.232085
ABUNDANCE ABSOLUTE 40 -9.872085
ABUNDANCE ABSOLUTE 41 -11.052185
ABUNDANCE ABSOLUTE 42 -10.552085
ABUNDANCE ABSOLUTE 43 -20.000000
ABUNDANCE ABSOLUTE 44 -10.632085
ABUNDANCE ABSOLUTE 45 -11.351985
ABUNDANCE ABSOLUTE 46 -10.782085
ABUNDANCE ABSOLUTE 47 -11.532085
ABUNDANCE ABSOLUTE 48 -10.702085
ABUNDANCE ABSOLUTE 49 -10.812085
ABUNDANCE ABSOLUTE 50 -10.472185
ABUNDANCE ABSOLUTE 51 -11.472185
ABUNDANCE ABSOLUTE 52 -10.232085
ABUNDANCE ABSOLUTE 53 -10.962085
ABUNDANCE ABSOLUTE 54 -10.301985
ABUNDANCE ABSOLUTE 55 -11.342085
ABUNDANCE ABSOLUTE 56 -10.342085
ABUNDANCE ABSOLUTE 57 -11.301985
ABUNDANCE ABSOLUTE 58 -10.892085
ABUNDANCE ABSOLUTE 59 -11.762185
ABUNDANCE ABSOLUTE 60 -10.972185
ABUNDANCE ABSOLUTE 61 -20.000000
ABUNDANCE ABSOLUTE 62 -11.462085
ABUNDANCE ABSOLUTE 63 -11.952185
ABUNDANCE ABSOLUTE 64 -11.351985
ABUNDANCE ABSOLUTE 65 -12.572185
ABUNDANCE ABSOLUTE 66 -11.332085
ABUNDANCE ABSOLUTE 67 -12.212185
ABUNDANCE ABSOLUTE 68 -11.542185
ABUNDANCE ABSOLUTE 69 -12.472185
ABUNDANCE ABSOLUTE 70 -11.392085
ABUNDANCE ABSOLUTE 71 -12.412085
ABUNDANCE ABSOLUTE 72 -11.602185
ABUNDANCE ABSOLUTE 73 -12.602185
ABUNDANCE ABSOLUTE 74 -11.362085
ABUNDANCE ABSOLUTE 75 -12.192185
ABUNDANCE ABSOLUTE 76 -11.112085
ABUNDANCE ABSOLUTE 77 -11.122085
ABUNDANCE ABSOLUTE 78 -10.672185
ABUNDANCE ABSOLUTE 79 -11.462085
ABUNDANCE ABSOLUTE 80 -11.342085
ABUNDANCE ABSOLUTE 81 -11.572185
ABUNDANCE ABSOLUTE 82 -10.522185
ABUNDANCE ABSOLUTE 83 -11.762185
ABUNDANCE ABSOLUTE 84 -20.000000
ABUNDANCE ABSOLUTE 85 -20.000000
ABUNDANCE ABSOLUTE 86 -20.000000
ABUNDANCE ABSOLUTE 87 -20.000000
ABUNDANCE ABSOLUTE 88 -20.000000
ABUNDANCE ABSOLUTE 89 -20.000000
ABUNDANCE ABSOLUTE 90 -12.392085
ABUNDANCE ABSOLUTE 91 -20.000000
ABUNDANCE ABSOLUTE 92 -12.972185
ABUNDANCE ABSOLUTE 93 -20.000000
ABUNDANCE ABSOLUTE 94 -20.000000
ABUNDANCE ABSOLUTE 95 -20.000000
ABUNDANCE ABSOLUTE 96 -20.000000
ABUNDANCE ABSOLUTE 97 -20.000000
ABUNDANCE ABSOLUTE 98 -20.000000
ABUNDANCE ABSOLUTE 99 -20.000000
READ PUNCH
TITLE ATLAS12 p1_Z0.00561 TEFF 4800 GRAVITY 6.000
OPACITY ON LINES
OPACITY ON XLINES
CONVECTION OVER 1.25 0 36
TURBULENCE OFF  0.00  0.00  0.00  0.00
SCALE 72 -6.875 0.125 4800 6.000
ITERATIONS 60
PRINT 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
PUNCH 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
BEGIN
END
EOF
mv fort.7  /home/chen/datashare/hizGC/out_mod/p1_Z0.00561/p1_Z0.00561_t4800g6.000k2mxl1.25/p1_Z0.00561_t4800g6.000k2mxl1.25os.atlas12
rm -f fort.* for12
